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                            |  | ● Tissue engineering | Microbe research
 
 
   
                                
                                  | Identifying the bacteria causing bulking with fluorescence in situ hybridization (FISH) and real-time PCR
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                                  | Objective |  
                                  |   Activated  sludge process is popular technology using complex microbes in wastewater  treatment plants around the world. However, there is a big problem that the sludge does not settle easily after this process and poor  settling causes carryover of sludge from the final  effluent clarifies.  It is called bulking, and this problem is a chronical problem. It is well known  that bulking is caused by filamentous bacteria. In this study, we used two  methods, fluorescence in situ hybridization  (FISH) and real-time PCR, and try to identify a bacteria causing  bulking. |  
                                  | Results |  
                                  |  To identify bacteria  causing bulking, we used two methods, FISH and real-time PCR. First, FISH is a  cytogenetic technique and it dyes specific bacteria by FISH probes coupled complementarily  with bacteria’s rRNA. We have identified the dominant filamentous  bacteria in municipal wastewater treatment plants using the FISH probes. As a  result, it is showed that Chroloflexi Type  1851 (Fig. 1) is a dominant filamentous bacteria in activated sludge. Moreover,  revealed that the abundances of Chroloflexi Type 1851 filamentous bacteria in activated sludge, it is clear that  increase in gene copy number of Type 1851 corresponded to a level of bulking it  is called SVI. This suggests that proliferation of Chloroflexi type 1851 filamentous bacteria caused the bulking.
 
  
Fig.1 Chroloflexi  Type 1851 filamentous  bacteria  
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                         | ● Vascular |  
                            | ● Liver |  
                            | ● Hair |  
                            | ● Pacnreas |  
                            | ● Bone |  
                            | ● Lab Chip/ MEMS |  
                            | ● Surface modification |  
                            | ● Microbe |  
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                      |  Fukuda Lab, Faculty of Engineering, Yokohama National University |  |